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Research Training Program
Highlights from 2006
Updated: 16 June 2006

Smithsonian Institution
National Museum of Natural History

Research Training Program


APPLICATION and INFORMATION
Special 2006 Update


2006
Quick Links

Summer Session Index - 2006

A total of 17 undergraduate students are anticipated to join the RTP Class of '06, including 3 students from the Notre Dame partnership program.

Participants - 2006

Session Dates
28 May 2006 - 5 August 2006

A total of 20 undergraduate students are anticipated to join RTP Class of '06.

Participant List  Statistics


Finalist Review Summary

The traditional RTP application deadline of February 1st was extend to February 15th to compensate for the late release (2 Dec 05) of paper-based application materials, that had to be designed last minute because on-line line systems remained unavailable. There were 167 applications received for consideration by the application deadline of Wednesday, 15 February 2006, of which 154 were complete enough to effectively review. Some applications received after the deadline and some applications received for general NMNH internship placement were also considered. A total of 172 applications were considered for placement in the 2006 session of the Research Training Program.

A two phase process was conducted to identify finalists. Semi-finalists were not selected this year. Three evaluators (Lynn Copes, Chris Hardy, and Elisa Maldonado), all former RTP participants and therefore uniquely familiar with the program, were selected from outside the institution (Arizona, California, and Pennsylvania) to conduct a pre-screening of the entire application set and nominate top candidates for consideration as finalists. In collaboration with this effort an on-site RTP panel of judges also conducted a pre-evaluation of all applications received. This panel of judges reviewed applications from within their discipline and nominated appropriate candidates for the finalist set. The Entomology judge defered applications to the Invertebrate Zoology judge. There were 46 finalists. The six judges then reviewed application documents from all 46 finalists by carefully reading and evaluating application folders including completing a 100 point score sheet to quantify their marks.

Review of finalists began Tuesday, 21 Feb 06 at 1:00 p.m. Judges had until noon, Monday 27 Feb 06 to complete their evaluation and submit final scores and ranks. The review deadline was extended to noon on Tuesday, 28 Feb 06 to provide judges adequate time to effectively evaluate all folders. One judge (Anthropology) did not complete the review and therefore their contribution to the evaluation could not be included in the final ranking.

Reviewers typically score differently with some generally awarding higher scores and others awarding lower scores. To adjust for these differences, finalist scores were normalized based on applicant rank. The judges met Thursday, 2 March 2006 beginning at 9:00 a.m. to discuss final rankings, nominate the target of 10 candidates for participation and identify complementary research advisors to host students. Two judges were out of town (Mineral Science and Vertebrate Zoology) and contributed comments but couldn't attend for the discussion. Another judge (Anthropology) didn't complete the review and had a conflicting appointment and therefore didn't participate in the discussion, final selection, or placements. The meeting concluded at 11:30 a.m. resulting in 13 nominees for participation and 7 alternates. At the time of announcement (7 March 2006), one position remained undeclared, pending discussion with potential advisors and proposed projects.

Adjustments in budget allocations and identification of additional available research advisors increased the program slots available from 10 to 15, and then further adjustments were done resulting in even more positions available, from 15 to 18. During the alternate consideration phase (15 - 24 March 2006) new funding opportunities became available, specifically from the Latino Initiative Fund and Max Berry donation, making possible the placement of even more students culminating in a total of 20 RTP positions for 2006.

The RTP '06 panel:

- Laurie Burgess: representing Anthropology (previously served on several RTP selecting panels)

- Gene Hunt: representing Paleobiology (former RTP intern and new curatorial hire)

- Tim McCoy: representing Mineral Sciences (served on many RTP selection panels, hosted many RTP students)

- Ted Schultz: representing Entomology (hosted several RTP and other interns and representing Dept. Chairsas well as information link to NMNH administration)

- Ashleigh Smythe: representing Invertebrate Zoology. (current Post Doctoral fellow and link to our fellows and graduate students community)

- Jun Wen: representing Botany (former post dococtoral fellow and new curatorial hire)

- Neal Woodman: representing Vertebrate Zoology (affiliated agency representative, hosted several RTP and other interns, served on RTP scoring panels, also information link to Senate of Scientists)



Research Training Program
Participants - 2006

Class of 2006
 
Last Name
First Name
Home University Year in School Citizenship Research Advisor
Alvarez Jorge University of Puerto Rico, Mayaguez Sophomore US Conrad Labandeira & Bill DiMichele
Armgardt Emily Seattle University Junior US Ellen Strong
Barkley Madison Mount Holyoke College Junior US Mike Wise
Brown Julia Vanderbilt University Junior US Gene Hunt
Cockrell Bryan Princeton University Sophomore US Ed Vicenzi
Ennis Megan Morehead State University Non-graduating Senior US Tim McCoy
Faust Katherine Louisiana State University Sophomore US Terry Chesser
Hamilton Paige University of Notre Dame Junior US Dave Hunt
Job Jayme Minnesota State University, Moorhead Junior US Eric Hollinger
Ketchum Sheena University of Notre Dame Junior US Betty Meggers & Paulina Ledergerber
Marsteller Sara Cornell College Junior US Don Ortner
Martinez Juan Andres University of the Republic of Uruguay Graduating Senior Uruguay Don Wilson
McMahan Caleb Erskine College Junior US George Zug
Moses Sylvia University of California, Berkeley Junior US Ed Vicenzi
O'Connor Alisa University of Notre Dame Junior US Eric Hollinger
Oreska Matthew College of William and Mary Junior US Matt Carrano
Rasmussen Nick Oklahoma State University Graduating Senior US Dick Thorington
Saupe Erin St. John's University Junior US Brian Huber
Strahl Maya Berry College Non-graduating Senior US Vicki Funk
Vann Kimberly University of Mary Washington Junior US John Brown

Alternates
Philips Jennifer Lewis and Clark College Junior US Zoology

Declined
Arguello Alexander St. Mary's College of Maryland Sophomore US DECLINED
Barton Melissa Colorado College Graduating Senior US DECLINED
Kelley Emily University of Notre Dame Junior US DECLINED

Research Training Program
Participant Summaries
2006

Students selected to join the RTP Class of '06 had until Wednesday 15 March 2006 to notify the RTP office if they accepted or declined participation in the summer program. One student selected to participate in the RTP '06 summer received and accepted an offer from another site prior to RTP notification and therefore immediately declined (Kelley). The position was refilled with an alternate (Hamilton). On the notification date (15 Mar 06) another student declined participation (Barton). Alternates for whom we were able to find funding and placement were contacted Friday, 17 March 2006. One alternate (Arguello) had already accepted an offer from another site and therefore had to decline further consideration. Alternates offered a position in the program had until Friday 24 March 2006 to notify the RTP office of their intentions and had to formally accept or decline by Friday, 31 March 2006.

RTP Class of '06

Jorge Alvarez   |  Emily Alrmgardt   |  Madison Barkley   |  Julia Brown
Bryan Cockrell
  |  Megan Ennis   |  Katie Faust  |  Paige Hamilton
Jayme Job
   |  Shenna Katchum  |  Sara Marsteller  |  Juan Andrea Martinez
Caleb McMahan
    |  Sylvia Moses  |  Alisa O'Connor  |  Matthew Oreska
Nick Rasmussen
  |  Erin Saupe    |  Maya Strahl   |  Kimberly Vann



  • Gender: Male
  • Ethnicity/Race:
  • Institution: University of Puerto Rico, Mayaguez
  • Status: Sophomore
  • Major: Geology

Career Goals:

Sponsor: Latino Initiatives Fund


Jorge Alvarez

I am from Hatillo, Puerto Rico. I am a sophomore at the University of Puerto Rico, Mayaguez Campus, majoring in Geology. After graduating I plan on attending graduate school in the US, pursuing a degree in paleontology. Lately, I've been looking into ichnology, the study of trace fossils, but I am interested in anything related to paleontology.

I am vice president of the Student Geological Society of my campus. I do some volunteer work in the schools geology museum, giving small talks to children, trying to promote their interest in geology and paleontology. I greatly enjoy field experiences, which is provided regularly by the society and geology class field trips, where we learn more about Puerto Rico's geology.

Last year I was part of NASA's LOR (Life On the Rocks) summer internship at Penn State University. It was an excellent opportunity, learning much and meeting new people, which I hope is repeated (and, I'm sure, improved) this year. It was during this program that I first visited the Smithsonian, which although brief, was a great experience.

On the personal side: On my free time I enjoy reading, video games, singing along to music I like (not a pretty experience, I've been told...) going to the beach and having fun with my friends, and watching the Discovery, Science and Animal Planet channels. I'm a happy guy, always on a good mood, and trying to cheer people up. Very excited to meet everyone else!


Research Advisors:

Conrad Labandeira

Research Paleobiologist and Curator of Fossil Arthropods. B.A. (1980) California State University, Fresno; M.S. (1986) University of Wisconsin, Milwaukee; Ph.D. (1990) University of Chicago. Research specialties: interactions between plants and insects in the fossil record; fossil arthropods, particularly insects; evolution of mouthparts of insects; member ETE Program. Science Unit: Department of Paleobiology.

Bill DiMichele

Research Paleobiologist and Curator of Paleobotany. B.A. (1974) Drexel University; M.S. (1976), Ph.D. (1979) University of Illinois. Research specialties: morphology, systematics, and paleoecology of late Paleozoic plants, particularly the structure of late Paleozoic ecosystems and the relationship between long-term ecological and evolutionary patterns. Member, ETE Program. Science Unit: Department of Paleobiology.


Title:
Plant-insect associations from the Early Permian of north-central Texas: Early or Delayed Colonization?

Hypothesis: The level of insect damage is significantly lower than that of modern flora in environments similar to those found in north-central Texas in the Early Permian, because of the much lower diversity of insects at the time and the narrow usage of resources by the organisms.

Project Summary: Millions of years ago a Permian-age Earth underwent drastic changes in its climate, afecting the ecosystem worlwide. This was the last time such event has happenned. This research focuses on the study of plant-insect interaction evidence from a flora collection of the same age, coming from north-central Texas, so as to better understand the ecosystem's response to an event like this. The counting and identification of both flora and insect damage pattern is anticipated to provide insight into of the roles insects played in the survival and colonization of land of said plants.

Project Description: The flora chosen for this research comes from part of a series of early Permian age mudstone beds called redbeds that occur throughout North Central Texas. At the time this area was on the western margin of tropical western equatorial Pangea, and was on the eastern shelf of the Midland Basin. This area and its specimens, both plant and vertebrates, are the classic example of the Early Permian biota. This flora comes from a warm period, within a series of cold-warm pulses that were occurring at the time. The analysis for insect damage will help us understand the early evolution of insect herbivory.

Plant specimens will be organized taxonomically and assessed quantitatively by species. Several of the specimens will be chosen for photography. The images taken will be processed using photo editing software. All of the specimens will be examined for insect damage. The different types of insect feeding patterns will be counted and the flora compared other studies of insect damage on floras from this time period.

Materials and Methods: A hand lenses will be used for identification of plant specimens and insect damage spotting.



  • Gender: Female
  • Ethnicity/Race:
  • Institution: Seattle University
  • Status: Junior
  • Major: Biology

Career Goals: Graduate studies in evolution and development of invertebrates and a career in invertebrate research.

Sponsor: Alice Eve Kennington Internship Endowment


Emily Armgardt

I am originally from Sturtevant, Wisconsin but I usually tell people that I'm from Milwaukee or even Chicago seeing as no one knows where Sturtevant is. I am currently a junior at Seattle University majoring in biology. I hope to pursue a degree in developemental biology of invertebrates in graduate school, however I'm still undecided as to where I will go or what exactly I intend to do with all this schooling.

I have been a volunteer interpreter at the Seattle Aquarium for the past year, and I have learned so much in my short time there. I spend my Saturday mornings at the Aquarium talking to the public about the animals in the touch tanks, trying to communicate my fascination with marine invertebrates. My absolute favorite thing to do while volunteering at the aquarium is feeding the giant Pacific octopuses and talk to the guests about how amazing these creatures are.

I had the opportunity to take the evolution and development class at Friday Harbor Labratories last summer and it proved to be one of the most challenging and rewarding experiences thus far in my academic career. During the course of the class, I observed the musculature of two marine Harpacticoid copepod species using phalloidin and flourscent micrsocopy. Because of my research, I was able to travel to the annual SICB meeting and present a poster on my findings. I am currently doing further research on this topic, trying to investigate two different Harpacticoid species through confocal microscopy.

On the personal side: Although I have always been around water, growing up on the shores of Lake Michigan, from the first second I saw the ocean as a 10 year old I knew that I wanted to be a marine biologist. I was also quite taken with the beauty of the Pacific Northwest, especially the mountains around the same time. As a girl growing up in a small midwestern village (yes, village) both of these things made me quite the little oddity, and I hold the distinction of being the farthest from home of all my high school friends. When I'm not off galavanting in Seattle, I like to do pretty normal things: reading, catching up with friends, sleep, and things that are not related to school or work.


Research Advisor:

Ellen Strong

Research Zoologist, Curator of Mollusks. B.A. (Honors) (1991) University of California, Berkeley; Ph.D. (2000) George Washington University. Research specialties: Phylogeny of caenogastropods using morphological and molecular data. Science Unit: Department of Invertebrate Zoology.


Title:
Ontogenetic Changes in Shell Microstructure of Freshwater Gastropods

Hypothesis: Lake Tanganyika gastropods did not evolve their highly calcified shells solely as a result of predation by decopod crabs.

Project Summary: The Lake Tanganyika cerithioid gastropods are a highly endemic and speciose species flock. Scanning electron microscopy will be utilized to examine ontogenetic differences in the shell microstructure. Similarities and differences will be integrated with a pre-existing morphological data matrix and compared with a current molecular phylogeny. These data will be used to test hypothesis that assert differences in shell microstructure are the consequence of predation by crabs.

Additional Opportunities: One week of field work at Smithsonian's Marine Station in Fort Pierce, Florida to study ptenoglossan snails, a group of predatory and parasitic marine gastropods that prey on echinoderms and cnidarians. Work will include gastropod identification and field techniques for the collection and processing of marine micro-mollusks.

Project Description: Because of the unique and heavily calcified and decorated shells of cerithioid snails found in Lake Tanganyika, scientists have puzzled over the phylogenetic relationships (Michel et al, 1992). Many previous studies have attempted to explain the pattern of speciation present in the lake through various means, based on geography and behavior. Resolution within the phylogeny has been poorly understood for many years. An earlier study (West and Cohen, 1996) has given predation as the main origin of the unusual phenotypes exhibited by the different gastropod groups within Lake Tanganyika. However, this study looked exclusively at the adult microstructure of the shells. Examining the ontogenetic sequence present in shells will provide some evidence for the evolution of the gastropod groups within the lake. Additionally, the characters collected from the shell microstructure will be plotted against a current molecular phylogeny of the Lake Tanganyikan gastropods. Previously, the only method for obtaining shell microstructure was through crushing the shells and analyzing the cleanest piece available. Using the diamond saw, the shells can now be precisely cut to reveal the microstructure and sequence of ontogeny more easily. A trip to the Smithsonian's field station at Fort Pierece, Florida will augment the lab work by demonstrating collecting techniques of different snail groups along.

Materials and Methods: Samples will be prepared either by embedding the shells in resin and then cut using the diamond blade saw, or cut with the diamond blade saw and then embedded in resin. Shells will be cut along the long axis of the shell to reveal microstructure throughout ontogeny. The resulting shell will then be analyzed on the SEM.

The results of this research are anticipated to be presented at the SICB meeting in Phoenix, Arizona 3-7 January 2007.



  • Gender: Female
  • Ethnicity/Race:
  • Institution: Mount Holyoke College
  • Status: Junior
  • Major: Geology

Career Goals: After gradaute school, achieve a career in geology, focusing on rock forming minerals.

Sponsor: Smithsonian Women's Committee Endowment


Madison Barkley

Ms. Barkley is from Hague, Virginia. She is currently a Junior at Mount Holyoke College in South Hadley, Massachusetts where she is majoring in Geology with a minor in Astronomy. She plans to attend graduate school with focused study in mineralogy and gemology.

On the personal side: Ms. Barkley's interests include geomagnetism, the outer solar system (Uranus, Neptune, Pluto & the Kuiper Belt), and robotics. She an avid horse enthusiast and has been riding and competing for over 10 years. Most recently, she was a member of the Mount Holyoke College Equestrian Team.


Research Advisor:

Mike Wise

Geologist. B.A. (1979) University of Virginia; Ph.D. (1987) University of Manitoba. Research specialties: mineralogy, petrology, and geochemistry of pegmatites; petrogenesis and evolution of pegmatites and pegmatite-generating granites; systematic mineralogy; regional distribution of pegmatites in the Appalachians. Science Unit: Department of Mineral Sciences.


Title:
F-OH- substitution and thermal effects on the crystal structure of pegmatitic topaz

Hypothesis: The focus of this project is to examine the changes in topaz crystal structure caused by F-OH- substitution and to investigate the structural changes due to temperature in order to determine the viability of topaz as a geothermometer in granitic pegmatites.

Project Summary: This research examines the changes of topaz crystal structure with varying temperature and composition. Topaz is a fluorine-rich mineral that commonly occurs in pegmatites. The topaz crystal structure will expand or contract depending on the ratio of fluorine to hydroxyl (OH-) in the crystal structure. Temperature may also affect the dimensions of the crystal structure. X-ray diffraction will be used to determine how these variables affect the structure of topaz.

Project Description: Pegmatites are intrusive igneous rocks that are characterized by unusually large grain sizes (> 20mm). The large grain size can be attributed in part to relatively rapid cooling in a water and volatile rich melt. Volatiles, such as fluorine (F), boron (B), and phosphorous (P), lower the viscosity as well as the solidus temperature of the melt and facilitate the crystallization of large crystals and the development of internal zoning. There are two geochemical types of granitic pegmatites. LCT pegmatites are rich in lithium (Li), cesium (Cs), and tantalum (Ta) and are usually associated with orogenic and collisional origins. NYF pegmatites are related to anorogenic granites and are enriched in niobium (N), yttrium (Y), and are particularly rich in fluorine (LCT pegmatites typically have low to moderately high F contents). In NYF-type pegmatites, the F rich mineral topaz (Al2SiO4(F,OH)2) is commonly found, whereas topaz is generally uncommon in LCT pegmatites.

Topaz displays a relatively narrow range of bulk compositions; the most important variation is due to substitution of OH- for F. As OH- substitutes for F, the crystal structure of topaz modifies to accommodate the new element. Hydroxyl has a larger atomic radius than fluorine and will stretch the structure of the crystal. Rosenberg (1967) concludes that as OH- substitutes for F, the b cell dimension increases. A small change in c and no change in a were also noted. In high F environments, such as pegmatites and rhyolites, the b cell dimension of topaz should be at its smallest value. However, Rosenberg's work did not take into account unit cell changes due to temperature or pressure which are important factors in pegmatite genesis. The focus of this project is to examine the changes in topaz crystal structure caused by F-OH- substitution and to investigate the structural changes due to temperature in order to determine the viability of topaz as a geothermometer in granitic pegmatites.

Materials and Methods: X-Ray Diffraction will be the main tool in examining the specimens. Sample localities wwill be chosen that represent pegmatites from both LCT and NYF geochemical classes. Topaz samples will be ground into a power and mounted onto glass fibers. For some samples, additional material will be collected in order to perform a temperature study. The additional material will be heated in a furnace to temperatures between 500o-1000o C before being powdered. All samples (heated & unheated) will be X-rayed using the Rigaku micro-diffractometer. A computer program will generate data in the form of unit cell dimensions for each sample. These data will be used to evaluate structural changes due to composition and temperature.



  • Gender: Female
  • Ethnicity/Race:
  • Institution: Vanderbilt University
  • Status: Junior
  • Major: Ecology, Evolution, and Organismal Biology

Career Goals: After gradaute school, achieve a career focusing on understanding human impact on ecosystems including global warming and patterns of climate change as related to environmental policy.

Sponsor: NMNH Office of the Director and William A and Nancy F. McMinn Scholarship


Julia Brown

I am originally from Bethesda, MD, and am currently a Junior at Vanderbilt University in Nashville, Tennessee where I am majoring in Ecology, Evolution, and Organismal Biology. After college, I hope to attend graduate school in ecology or a related field, and perhaps go on to do ecological or environmental research or have a career in conservation or science education.

I have been involved with undergraduate research in the Biological Sciences Department at Vanderbilt for several semesters, and have studied various mutualisms through molecular and ecological stoichiometry techniques. However, I am looking forward to broadening my research focuses through my project in paleobiology this summer! I also work as a lab T.A. for a section of the Biology Today class at Vanderbilt.

On the personal side: I love everything about biology, and am incredibly excited to be working at the Smithsonian this summer. I have been coming to the National Museum of Natural History on a regular basis since I was in preschool, when I used to spend my days reciting dinosaur names to my teachers. Nowadays, I enjoy running, hiking, eating, visiting museums, traveling and seeing as many of my friends as possible all over the country and abroad. I love the Washington, D.C. area, and can't wait to spend more time downtown, as well as in the surrounding natural areas and by the Potomac River.


Research Advisor:

Gene Hunt

Associate Curator. B.S. (1995) Duke University; Ph.D. (2003) University of Chicago. Research specialties: long-term evolutionary changes; fossil ostracodes. Science unit: Paleobiology. Science Unit: Department of Paleobiology.


Title:
Body size relationships to climate in Ostracodes

Hypothesis: There will be an increase in ostracode body size over time as global deep-sea temperature decreases.

Project Summary: The project will involve examining macroevolutionary trends in deep-sea ostracodes, and will focus on the evolution of ostracode body size over a period of approximately 40 million years. Correlations between body size and paleotemperature estimates will be investigated in order to elucidate the mechanisms underlying Cope's Rule: the tendency for body size to increase over time.

Project Description: A wide variety of organisms display a phenomenon known as Cope's Rule, which is a general tendency of body size to increase over time. At the moment, the mechanisms behind this evolutionary trend are poorly understood. Ostracodes are small bivalve crustaceans with an excellent fossil record that appear to exemplify Cope's Rule. Preliminary studies have indicated that changes in body size in the ostracode genus Poseidonamicus are significantly correlated with changes in deep-sea temperatures during the Cenozoic. Ostracodes appear to become larger as the climate cools. This finding relates Cope's Rule to the equally notable Bergmann's Rule, which states that modern organisms in colder climates will be larger than those in warmer climates. Cope's Rule, in this scenario, is then a temporal manifestation of the spatial Bergmann's Rule. This research follows an initial study and examine a number of ostracode populations from a series of sites on the ocean floor in order to see if the same pattern appears across additional sites and species. An increase in ostracode body size as global deep-sea temperatures decrease over time is expected.

Materials and Methods: The research project will involve two main procedures involving deep-sea ostracode specimens. The samples come from different locations in the ocean floor where research vessels from